Did you pull the caliper sliders and clean/grease them when you did the pads? Sounds like you have a brake caliper not floating properly.
Also, sanded the rotors? They shouldn't have needed sanding. At all. Ever. If the finish was that bad you should have taken them back. What they do require is a good dose of brake cleaner (or denatured alcohol) and some elbow grease to remove the factory-applied protectant. Not doing so can cause real problems with break-in - glazed rotors, reduced brake effectiveness, grabbiness, etc.
Brad